CDS
| Accession Number | TCMCG006C86868 |
| gbkey | CDS |
| Protein Id | XP_013685058.1 |
| Location | complement(join(42440342..42440488,42440578..42440862,42440934..42441215,42441313..42441620,42441703..42441964,42442049..42442320,42442405..42442555,42442632..42442796,42442923..42443048,42443476..42443616)) |
| Gene | LOC106389378 |
| GeneID | 106389378 |
| Organism | Brassica napus |
Protein
| Length | 712aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_013829604.2 |
| Definition | 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic-like [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | G |
| Description | 1-deoxy-D-xylulose-5-phosphate synthase |
| KEGG_TC | - |
| KEGG_Module |
M00096
[VIEW IN KEGG] |
| KEGG_Reaction |
R05636
[VIEW IN KEGG] |
| KEGG_rclass |
RC00032
[VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] |
| KEGG_ko |
ko:K01662
[VIEW IN KEGG] |
| EC |
2.2.1.7
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00730
[VIEW IN KEGG] ko00900 [VIEW IN KEGG] ko01100 [VIEW IN KEGG] ko01110 [VIEW IN KEGG] ko01130 [VIEW IN KEGG] map00730 [VIEW IN KEGG] map00900 [VIEW IN KEGG] map01100 [VIEW IN KEGG] map01110 [VIEW IN KEGG] map01130 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGCTCTCTCTGTATTTCGATTTCCTTCTTACTTGAGTAGAGAAACTTCAACAGATCATTGCAATACTACTTCTTTATCTTCTTCTCGATCTTTGGCTACATATTTTCCATCAATATGCCGCAGCAGTACCGTTTTTCCTTCAAAAATAAGAACAACAGTAAATGGCTCACTTGTAAAGAAGGGTGACTATTATTCTACAAGACCACCAACTCCTTTGTTGGACACAATCAACCATCCAATCCACATGAAAAATTTGTCCATCAAGGAACTCAAAGCTCTTTCAGACGAGCTGAGGTCAGATGTTGTCTTCAATGTTTCAAAAACTGGAGGACATTTAGGTTCCAATCTTGGTGTTGTTGAGCTCACAGTGGCTCTGCATTACATCTTCAATACTCCTCAAGATAAGATTCTCTGGGATGTTGGTCATCAGTCTTATCCTCACAAGATTCTAACGGGGAGAAGAGGAAAGATGAAGACACTGAGACAAACCAATGGCCTATCTGGTTTCACCAAGCGAGGAGAGAGTGAACATGATTCTTTTGGCACTGGACATAGTTCAACCACAATATCTGCAGGATTGGGGATGGCTGTGGGAAGGGACTTGAAGGGTAGGGACAACAACGTGGTTGCAGTTATAGGCGATGGTGCAATGACAGCTGGACAAGCTTATGAAGCCATGAACAATGCTGGCTATTTGGACTCTGACATGATTGTGATTCTCAATGACAACAAGCAAGTTTCTTTGCCAACTGCTAACTTGGATGGACCAACACCACCTGTTGGAGCTTTTAGCAGGGCTCTTAGTAAGTTGCAGTCTAAACGTCCTCTTAGGGAACTAAGAGAAGCTGCAAAGGGGATGACAAAGAAAATTGGAGGATCAATGCACCGGCTTTCTCAGTATGCTCGTGGAATGATTAGTGGGGCTGGTTCAACACTATTTGAAGAACTTGGTTTCTACTATATTGGTCCAGTTGATGGACACAACATAGATGATTTGGTTTCAATTCTTAAAGAAGTAAAGAGCACTCGAACCTCAGGACCAGTTCTTATTCATGTCGTGACTGAGAAAGGTCATGGATATCATTATGCAGAGAGAGCACATGACAAGTATCACGGAGTTGTGAAATTTGATCCAGAAACTGGTAAACAGTTCAAAAACATTTCTGAAACTAAGTCTTACACGACCTATTTTGCGGAGGCCTTGATTGCAGAAGCAGAGGCACATAAAGATGTTGTTGCCATTCATGCAGCCATGGGAGGTGGGACTGGGTTGAATCTCTTCCAACGCCGCTTCCCTACACGTTGTTTCGATGTCGGTATAGCAGAACAACATGCAGTTACTTTCGCTGCTGGTCTTGCATGTGAAGGTCTTAAGCCATTTTGTGCAATCTACTCGTCTTTCATGCAACGAGCTTATGACCAAGTTGTACATGATGTTGATCTACAAAAACTACCTGTGAGATTTGCAATGGATAGAGCAGGACTTGTGGGAGCAGATGGTCCAACGCATTGTGGAGCATTTGATGTGACGTTTATGGCATGTCTTCCAAACATGATAGTGATGGCTCCATCTGATGAAGCAGAACTTTTTAACATGGTTGCAACCGCTGCAGCTATAGATGACCGTCCTTCTTGCTTTCGATATCCTAGAGGAAACGGTGTTGGTGTTTCACTTCCTCCTGGAAACAAAGGTGTCCCTCTTGAGGTTGGAAATGGTAGGATACTCAGGGAAGGTGAGAGGGTAGCTCTATTAGGCTACGGATCAGCTGTTCAAAACTGTTTAGAGGCTTCTTCTATACTCGATAAACGAGGATTAAAGATGACTGTAGCAGATGCAAGATTTTGCAAGCCATTAGATATTGCTCTTATTCGAAAGTTAGCTAAATCTCATGAGGTTCTGATCACTGTTGAAGAAGGTTCAATTGGAGGGTTTGGATCACATGTGGTACAGTTTCTAGCACTAGATGGTCTTCTTGACGGAAAGCTCAAGTGGAGACCAATGGTACTACCTGACCGGTATACTGAGCATGGATCACCACTAGACCAACTGGCTGAAGCTGGCCTCACGGCTTCTCACATTGCAGCCACCGTACTTAACTTAATTGGGACACCCAGAGAAACCTTGTATTGGAAGTAA |
| Protein: MALSVFRFPSYLSRETSTDHCNTTSLSSSRSLATYFPSICRSSTVFPSKIRTTVNGSLVKKGDYYSTRPPTPLLDTINHPIHMKNLSIKELKALSDELRSDVVFNVSKTGGHLGSNLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMKTLRQTNGLSGFTKRGESEHDSFGTGHSSTTISAGLGMAVGRDLKGRDNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPTPPVGAFSRALSKLQSKRPLRELREAAKGMTKKIGGSMHRLSQYARGMISGAGSTLFEELGFYYIGPVDGHNIDDLVSILKEVKSTRTSGPVLIHVVTEKGHGYHYAERAHDKYHGVVKFDPETGKQFKNISETKSYTTYFAEALIAEAEAHKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYPRGNGVGVSLPPGNKGVPLEVGNGRILREGERVALLGYGSAVQNCLEASSILDKRGLKMTVADARFCKPLDIALIRKLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYTEHGSPLDQLAEAGLTASHIAATVLNLIGTPRETLYWK |